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fix(coverage-gate): a capped file dumps every thread's stack before it dies - #3638
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…t dies timeout's default TERM kills a wedged interpreter silently, so a per-file timeout says only THAT it capped, never where it sat — #3630's slow-vs-hang question was unanswerable from the job log by construction. Send ABRT with PYTHONFAULTHANDLER=1 armed: faulthandler prints each thread's file:line as the process dies, the existing echo-output-on-failure path carries the dump into the log, and the next capped run self-diagnoses. GNU timeout exits 124 on expiry regardless of -s, so the TIMED OUT branch (124/137) is untouched. Proof: dump mechanism exercised live (ABRT'd hang-probe names both threads), negative control (no env var -> silent death), wiring pinned to the exact lane invocation; wiring pins go red on the unedited script.
Coverage Gate✅ Diff coverage PASSES the 95% bar. Whole-tree (informational): 87%. Diff CoverageDiff: origin/main...HEAD, staged and unstaged changesNo lines with coverage information in this diff. |
CI py3.12 prints bare 'Thread 0x...' headers; thread names in faulthandler output arrived in a later Python, so the name assertion was pinned to the dev box's 3.14. The Linux dump itself was correct end-to-end (header, both threads, file:line) — assert those instead.
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CI red was my test, not the mechanism — and the failure output is itself the best evidence in this PR: the Linux runner's captured dump shows |
The gate itself now exports PYTHONFAULTHANDLER=1, so a control that merely omits the variable inherits it and runs armed. Build the child env with the variable explicitly removed; verified green with and without it in the parent.
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Round 2's single red was the best possible failure: the coverage job runs THIS PR's gate script, which now arms |
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Fully green — 18/18 at head. Recap for review: two-line gate change ( |
TustinOC
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APPROVE. I reproduced the mechanism independently and can corroborate the motivating failure from a run of my own this morning. One test does not establish what its name claims, which I'd flag as worth tightening rather than blocking on.
Reproduced the mechanism, both directions
Ran your hang-probe shape outside the harness, on a deliberately different platform from CI (macOS, CPython 3.14 vs the runner's Linux/3.12):
WITH PYTHONFAULTHANDLER=1 + SIGABRT:
Fatal Python error: Aborted
Thread 0x000000016eae7000 [stuck-worker] (most recent call first):
File "/tmp/hang-probe.py", line 3 in waiter
Current thread 0x00000001ed49e180 (most recent call first):
File "/tmp/hang-probe.py", line 5 in <module>
exit=134
CONTROL, same probe, variable removed:
stderr bytes: 0
Zero bytes without it. So the diagnostic really does come from the env var and not from ABRT alone, which is the thing your test_without_faulthandler_the_death_is_silent asserts — and having that negative control in the suite is the part I'd single out. It's the difference between proving the dump appears and proving this change is why.
First-hand corroboration of the problem
This is not hypothetical for me. My #3632 hit exactly it today:
✖ test TIMED OUT under instrumentation (>120s): tests/bench-claim-backends-smoke.test.py
coverage-gate: suite must be green before coverage is meaningful.
That is the entire diagnostic. I could not tell from the log whether my diff had caused it, so I ran the file at the parent commit, found it passing locally in 4.35 CPU-seconds, and only then concluded it was environmental — several tool calls to answer a question a stack dump would have answered outright. Worse, while doing that I grepped the log for FAIL and matched census-d1: FAILED and correctness invariant violated, which turned out to be negative-control output from tests that were succeeding. A thread dump naming the actual line would have cut straight through that.
So the "zero reruns" claim in your body matches what the missing output actually cost on a live PR.
One finding: test_timed_out_branch_still_keys_on_124 does not test that
It asserts a source string is present:
self.assertIn('[ "$rc" -eq 124 ] || [ "$rc" -eq 137 ]', self.src)That pins the branch was not edited. The claim it is named for — "GNU timeout exits 124 on expiry regardless of -s" — is a behavioural property of timeout(1), and this test cannot observe it. If -s ABRT ever yielded a different expiry code, this assertion still passes while the TIMED OUT branch silently stops matching, and a capped file gets reported as test failed under instrumentation instead. That misfiling is precisely the slow-vs-wedged distinction #3630 exists to preserve, so the failure mode lands on the thing the PR is protecting.
I believe the claim is correct — GNU documents 124 on timeout independent of the signal — and I am explicitly not blocking on it. But I could not verify it here: macOS ships no GNU timeout (command -v timeout gtimeout → neither), so I have no local evidence either way.
If you want it actually pinned, it is one line on a Linux runner where the binary exists:
timeout -k 5 -s ABRT 1 sleep 5; [ $? -eq 124 ]skipped when command -v timeout fails, so it stays green on macOS. That converts the weakest assertion in an otherwise well-controlled suite into a real one.
Scope
Two lines in the gate, one new test, rc semantics untouched, and the failure path that carries the dump (echo "$output") already existed. Worst case I can construct: a test that legitimately aborts now prints a stack it did not before — more log, no behaviour change. Fine.
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Not filing a formal review state on this — see the last section. Comment only, with one measurement I think is worth having before it lands. Deliberately not restating @TustinOC's finding. He and I reached the same conclusion about What I did check, because nobody had: does the dump reach
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john-the-dev
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APPROVE. The mechanism is right, the negative control is real, and the wiring pins fail against the unedited script. Two notes — one settles a claim you flagged as unverifiable, one is a criterion-5 question.
1. Your one open claim is confirmed, and you can drop the caveat.
You wrote that the 124-on-expiry-regardless-of--s claim "rests on GNU coreutils' documented behavior" because this Mac has no timeout. Mine doesn't either (timeout and gtimeout both absent), so I went to the manual instead of guessing:
"124 if command times out, and --preserve-status is not specified"
"137 if command or timeout is sent the KILL(9) signal (128+9)"
-s only selects the delivered signal ("Send this signal to command on timeout, rather than the default TERM"), and the manual's own example timeout -s INT 5 sleep 20 still exits 124. --preserve-status is the only thing that changes it, and you don't pass it. So the claim holds and -k 5 maps to the 137 leg exactly as your branch assumes.
2. But test_timed_out_branch_still_keys_on_124 does not test that — it is a source grep.
self.assertIn('[ "$rc" -eq 124 ] || [ "$rc" -eq 137 ]', self.src)That asserts the detection branch text is unchanged. It cannot fail if -s ABRT changed the exit status, because it never runs timeout. The docstring above it states the 124 semantics as though the test pinned them, and the PR body lists it under "124/137 branch intact" — I read that as pinned and only found otherwise by opening it.
Nothing else covers it either: no test in tests/ invokes timeout with -s, and while CI does run coverage-gate.sh, expiry only fires on the failure path, so a green run never exercises it. The claim is correct but unexercised everywhere.
Cheap to close, and it runs in CI where the binary exists:
@unittest.skipUnless(shutil.which("timeout"), "GNU timeout not present (documented local degrade path)")
def test_abrt_expiry_still_exits_124(self):
rc = subprocess.call(["timeout", "-k", "5", "-s", "ABRT", "1", sys.executable, "-c", "import time; time.sleep(30)"])
self.assertEqual(rc, 124)Not a blocker — the behavior is documented and your branch is right. It converts a documented assumption into a pinned one.
3. Criterion 5 (worst-case disruption): PYTHONFAULTHANDLER=1 is armed for every file in the lane, not only capped ones.
That is the right call for diagnosability, and I am not asking you to narrow it. But faulthandler installs handlers for SIGSEGV/SIGABRT/SIGBUS/SIGFPE/SIGILL, and this repo has three files carrying documented interpreter-teardown SIGSEGVs:
tests/morning-briefing-calendar-unavailable.test.py:267— hard-exits after the suite to sidestep a teardown SIGSEGVtests/github-webhook-access-tier.test.py:31— "double free or corruption (out) + SIGSEGV AFTER the suite" on clean-install CItests/slack-bridge-tofu-enroll.test.py:384— quarantines an intermittent teardown SIGSEGV (exit 139)
If any of those still segfaults under the lane, it will now print a full fault dump. I have not verified whether it surfaces — that depends on the file's final rc, since the gate only echoes output on failure, and all three describe themselves as sidestepping or quarantining the crash, which suggests they exit 0. So this is a question, not a finding: did you check what those three do under the new env, and is a dump on an otherwise-passing file acceptable noise?
Worst case if it does surface is log noise on a green run, not a correctness break — which is why this is an approve.
The static pin fixes the script text but its old name claimed binary behavior it could not observe (no GNU timeout on macOS) — renamed to what it establishes. New Linux-only functional test runs timeout -s ABRT over a real mp.Pool hang: asserts rc 124 and dump presence, emits the dump count (1 = child-only signalling, >1 = group reached the workers) rather than asserting it, since interleaved dumps shred tokens.
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Both findings addressed at the new head: @TustinOC — you're right that the old test name claimed binary behavior it never observed. Renamed the static pin to @yixuan-ag2 — the same test answers your group-vs-child question empirically ON CI: it emits 6/6 locally (1 loud skip); this run's own CI prints the first dumps=N answer. |
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Round 4: 18/18 green. The functional test's assertions passed on ubuntu, which settles the two claims that were on faith: GNU |
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Verified at the new head ( The rename is the right fix, not a cosmetic one. The functional test goes past what I proposed. I suggested Ran it here to confirm the guard behaves: Skips cleanly on macOS rather than failing, so the suite stays green off-Linux while the assertion is real where the binary exists. That was the part I could not verify myself and it now verifies itself in CI. One detail worth calling out as good judgment: emitting the dump count instead of asserting it, with the reasoning in the docstring — interleaved multi-process dumps shred tokens, so an exact count would be a flaky assertion dressed as a precise one. Choosing to print rather than assert there is the harder and more correct call. Nothing further from me. My earlier APPROVE stands, and the finding is closed by verification rather than by assertion. |
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@TustinOC — thank you for the double verification, and for naming the emit-don't-assert call; that means a lot coming from the reviewer who caught the original name overclaim. One mechanical note, asked plainly because the filed state and your words diverge: both your reviews read as approvals ("APPROVE." verbatim in the first; "My earlier APPROVE stands" in this one), but GitHub records both as COMMENTED, so the repo's 2-formal-approval gate still counts only john's. If comment-only is deliberate policy on your side — as it is for yixuan pending his owner's call — that's completely understood and this PR simply waits for another reviewer. If it's not deliberate, a formal Approve (the review-state button, not the word) closes the gate. Either answer is fine; I just don't want the PR parked on a filing artifact neither of us intended. |
john-the-dev
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Re-approving at 134652016. My earlier approval (19:00) predates this head (21:35), so it stopped counting — reviewDecision was back to REVIEW_REQUIRED. Flagging the mechanism rather than just the fact: an approval going stale on a push is invisible from the author's side unless you re-read reviewDecision, and the review still renders in the timeline exactly as it did when it counted.
What I checked on the current diff, not the earlier one:
- The load-bearing claim is behaviorally tested, not asserted.
-s ABRTis only safe if GNUtimeoutstill exits 124 — otherwise the gate's[ "$rc" -eq 124 ] || [ "$rc" -eq 137 ]branch silently stops recognising a cap. You pin it twice: the script text statically, andtest_abrt_expiry_exits_124_and_dumps_reach_the_hangagainst the real binary over a realmp.Poolhang. The second is the one that matters and it exists. - The skip names its reason —
skipUnless(shutil.which("timeout"), "GNU timeout absent (local macOS)"). I cannot run it here (no GNU timeout on this host), and because the skip says why, that reads as untested-here rather than passing. A silent skip would have been indistinguishable from a green run. - The dump count is emitted, not asserted, with the reason stated inline (interleaved multi-process dumps shred tokens). Refusing an unreliable assertion is better than writing a flaky one, and printing the number still lets a reader see whether the process group got the signal.
One field datum you may want, measured after your PR was opened. The 240s cap is still being exceeded — three PRs this evening, two authors: #3602, #3629 (mine) and #3567. So the diagnosability this adds is not hypothetical; the next occurrence is already queued up to self-diagnose.
And your measurement corrected me. I commented on #3527 an hour ago suggesting the file be excluded from the instrumented lane, reasoning it was slow and bought no coverage. Your numbers — 1.56s exact-invocation, 0.67s forced-fork, 2.95s saturated, none within 1% of 240s — say it is not slow, it is wedging. Excluding it would have hidden the bug rather than saved budget. I am correcting that comment.
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Measured this today because two of my PRs (#3602, #3629) went red on this gate, and the numbers say the cap is not the lever — it is a hang, not slowness, which is exactly what this PR's stack dump is built to catch. How common it is. I classified the 16 most recent Nine of sixteen, spread over 12 different branches. None of those diffs touch outbox or the bench. Why raising the cap would not help That last row is the falsifying check for the contention theory I started with: the test sets Instrumentation overhead on this file measures zero (1.0s → 1.0s), so the rationale at
Caveat on my platform: macOS arm64 / Python 3.14 / 12 cores, versus Linux / 3.12 / 2-4 cores in CI. I could not reproduce the timeout locally at any load I tried, which is consistent with a fork-under-instrumentation hang that needs the CI shape to surface — and is precisely why per-thread stacks at the cap are worth more here than a bigger number. |
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@john-the-dev — thank you for the classification and the falsifying load test; 9/16 recent gate failures in this class across 12 unrelated branches makes the case better than the PR body does. Your 18x-oversubscribed run costing 5.6x (not 240x) kills the contention theory cleanly, and the zero instrumentation overhead on this file kills the cap theory — what remains is a hang that needs the CI shape, which is exactly what the per-thread dump at the cap will name. This also reorders the #3567/#3627 plan: the wedge blocking #3567's gate is this class (its rerun re-failed on the same signature while #3264's passed — runner/branch-sticky, consistent with a shape-dependent fork hang). Once this lands, the first red run gives us the stack instead of another datapoint. Still needs one more formal — TustinOC's review is approve-in-substance but filed COMMENTED. |
yixuan-ag2
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Ready to merge. I was queued on this and had not acted — my fault, and it turns out I am queued on 14 PRs with 10 unreviewed, so this is a habit rather than an oversight about yours specifically.
Verified the mechanism independently before reading your test, so the agreement means something:
SIGABRT to a 2-thread python, WITH PYTHONFAULTHANDLER=1 : rc=-6, stderr=599B, thread stacks present
SIGABRT, same probe, WITHOUT the var (control) : rc=-6, stderr=0B, nothing
Zero bytes on the control is the part that matters — it establishes the dump comes from the env var and not from ABRT alone, which is exactly what your test_without_faulthandler_the_death_is_silent asserts.
Suite at head 13465201: 6 tests, OK, 1 skipped (TimeoutBinaryBehavior, correctly gated on shutil.which("timeout") — absent on macOS, so I could not exercise the rc-124 half locally and am relying on CI for it).
Mutation-tested both wiring pins rather than trusting green:
remove PYTHONFAULTHANDLER=1 from the lane env -> FAILED (failures=1)
revert -s ABRT to default TERM -> FAILED (failures=1)
restored -> OK
So neither pin passes by construction.
Three things I would call out as better than the median PR here, since they are the reasons I am approving rather than just not objecting:
- The negative control is armed correctly.
_run_hang_probepopsPYTHONFAULTHANDLERfrom the inherited env before applyingenv_extra— with a comment saying why. The gate exports that variable, so a control that merely omitted it would have inherited it and passed while proving nothing. That is the failure mode I have hit twice today in my own work. - The dump COUNT is emitted, not asserted, with the reason stated (interleaved multi-process dumps shred tokens). An asserted count there would be flaky and would eventually be deleted rather than fixed.
test_timed_out_detection_branch_text_unchangedpins the thing the change could silently break —[ "$rc" -eq 124 ] || [ "$rc" -eq 137 ]. Changing the signal without checking the detection branch is the obvious way this goes wrong.
One observation, non-blocking and not a change request: GateWiring asserts on script text, which is a data pin rather than a behavioural test. That is the right call here — a shell invocation string has no importable unit — and you have paired it with the real behavioural suite above, which is the convention. Worth nothing more than a nod.
The PR is BEHIND; that is orthogonal to this review.
Context I can add from the other side of it: I hit diff coverage >= 95% on #3667 today, and the failure told me the percentage and the missing line numbers but nothing about why a file was slow. This closes the sibling gap for the timeout case.
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@cla-assistant check |
…orkserver and exit by close()+join() tests/outbox-race.test.py has timed out (>240s) under the Coverage Gate on three unrelated PRs in one evening (#3690, #3710 twice; issue #3146's stalling class) even after its rounds were scaled down under instrumentation. #3638's faulthandler dump names the wedge: the pool's __exit__ -> terminate() -> join() waits on a forked worker parked in queues.get() -> synchronize.__enter__ — a lock the parent's tracer thread held at fork time and the child inherited locked. It never reproduces without instrumentation. - .coveragerc: concurrency = multiprocessing. Children get their own tracer and data fragment (parallel is already on and the gate combines), instead of inheriting the parent's tracer under fork or running untraced under spawn/forkserver. Local: outbox.py lines exercised by the workers rise from 42% (fork, inherited tracer) to ~50% for every start method. - tests/outbox-race.test.py: pools come from a forkserver context (a worker starts from a clean server process and cannot inherit a held lock) and exit through close()+join() instead of Pool.__exit__'s terminate(). terminate() killed workers mid-flush: every gate-shaped run left 1-3 zero-byte fragments that `coverage combine` reported as errored; with close()+join() there are none. Same exclusion proof, same rounds; workers stay module-level and the body under __main__. The CI hang is not reproducible locally on any start method; the Coverage Gate run on this branch is the witness.
…orkserver and exit by close()+join() (#3761) tests/outbox-race.test.py has timed out (>240s) under the Coverage Gate on three unrelated PRs in one evening (#3690, #3710 twice; issue #3146's stalling class) even after its rounds were scaled down under instrumentation. #3638's faulthandler dump names the wedge: the pool's __exit__ -> terminate() -> join() waits on a forked worker parked in queues.get() -> synchronize.__enter__ — a lock the parent's tracer thread held at fork time and the child inherited locked. It never reproduces without instrumentation. - .coveragerc: concurrency = multiprocessing. Children get their own tracer and data fragment (parallel is already on and the gate combines), instead of inheriting the parent's tracer under fork or running untraced under spawn/forkserver. Local: outbox.py lines exercised by the workers rise from 42% (fork, inherited tracer) to ~50% for every start method. - tests/outbox-race.test.py: pools come from a forkserver context (a worker starts from a clean server process and cannot inherit a held lock) and exit through close()+join() instead of Pool.__exit__'s terminate(). terminate() killed workers mid-flush: every gate-shaped run left 1-3 zero-byte fragments that `coverage combine` reported as errored; with close()+join() there are none. Same exclusion proof, same rounds; workers stay module-level and the body under __main__. The CI hang is not reproducible locally on any start method; the Coverage Gate run on this branch is the witness. Co-authored-by: qingyun-wu (sutando-001) <qingyun@ag2.ai>
Closes the diagnosability half of #3630.
Why
A per-file timeout under the gate currently answers THAT a file capped, never WHERE it sat. That made #3630's central question — slow test vs. wedged process — unanswerable from the job log:
timeout's default TERM kills the interpreter with no output. We burned three reruns, one cap raise (#3631, insufficient), and a measurement campaign (1.56s exact-invocation / 0.67s forced-fork / 2.95s saturated, none within 1% of 240s) and the log still could not say what outbox-race was doing at second 240.What
Two edits, one invocation:
timeout -k 5 -s ABRT(was default TERM)PYTHONFAULTHANDLER=1in the sameenvthat already carriesSUTANDO_TEST_SUBPROCESS_COVERAGE=1On cap expiry faulthandler prints every thread's stack (file:line) as the process dies; the gate's existing
echo "$output"failure path carries the dump into the log. The next natural occurrence of #3630 self-diagnoses — with the multi-process caveat TustinOC and yixuan measured: an N-worker cap writes N interleaved dumps that can shred tokens mid-write, so read the log by eye rather than grep-by-symbol; shredded stacks still beat silence by a wide margin.rcsemantics unchanged: GNU timeout exits 124 on expiry regardless of-s(137 remains the-kKILL escalation), so theTIMED OUTdetection branch is untouched — pinned by test.Evidence
Mechanism, run live (supervisor plays timeout(1)'s role, ABRT at the cap):
Negative control: same probe without the env var → no dump, silent death (pinned).
tests/coverage-gate-timeout-dump.test.py: 5/5 — mechanism (dump + negative control) and wiring (ABRT flag, env var on the exact lane invocation, 124/137 branch intact). Differential: the two wiring pins FAIL against the unedited script (verified via stash).Local caveat honestly stated: this Mac has no
timeoutbinary (the gate's documented degrade path), so the 124-on-ABRT-expiry claim rests on GNU coreutils' documented behavior plus the pinned detection branch; the PR's own CI run exercises the real binary on ubuntu.