Issues

• CUDA v11 Compatibility Issue

  bjing2016/alphaflow#56 · Filter by author Sizhang92190 opened on Sep 28, 2025

• The evaluation results are quite different from those in the paper.

  bjing2016/alphaflow#55 · Filter by author mapengsen opened on Sep 15, 2025

• PDB Ensemble analysis script

  bjing2016/alphaflow#54 · Filter by author lmqfly opened on Sep 1, 2025

• inference on CPU

  bjing2016/alphaflow#53 · Filter by author AndGob opened on Aug 4, 2025

• AlphaFoldCSVDataset init error: unexpected keyword argument 'data_dir'

  bjing2016/alphaflow#52 · Filter by author 193384770 opened on May 29, 2025

• How to test Alphaflow-MD model

  bjing2016/alphaflow#51 · Filter by author chensiyuan030105 opened on Apr 9, 2025

• Alphaflow not running

  bjing2016/alphaflow#50 · Filter by author farhanaz-farheen opened on Apr 8, 2025
  2

• How to generate double chain(antibody)?

  bjing2016/alphaflow#49 · Filter by author wangjx22 opened on Apr 5, 2025

• Issues with the packages installation

  bjing2016/alphaflow#48 · Filter by author Ravy-LFL opened on Mar 31, 2025

• got multiple values for keyword argument 'training

  bjing2016/alphaflow#46 · Filter by author Raul-araya-secchi opened on Mar 13, 2025
  2

• Training Time

  bjing2016/alphaflow#45 · Filter by author AmingWu opened on Feb 11, 2025

• Failed to load model

  bjing2016/alphaflow#44 · Filter by author johnnytam100 opened on Feb 6, 2025
  2

• error C++17 or later compatible compiler is required to use ATen

  bjing2016/alphaflow#42 · Filter by author aishwaryshivgan opened on Jan 28, 2025
  2

• Chain Index returns NoneType

  bjing2016/alphaflow#41 · Filter by author JoshuaEPSamuel opened on Dec 6, 2024
  2

• CUDA v12 install instructions

  bjing2016/alphaflow#40 · Filter by author MKCarter opened on Dec 2, 2024
  16

• abnormal protein structure

  bjing2016/alphaflow#39 · Filter by author fengmoC opened on Oct 19, 2024
  3

• Is 3.8 A the right value for projected C-beta coordinates?

  bjing2016/alphaflow#38 · Filter by author tsjain opened on Sep 6, 2024
  1

• Request to update Dockerfile

  bjing2016/alphaflow#37 · Filter by author dcbiton opened on Sep 5, 2024

• CA filtering in the evaluation code

  bjing2016/alphaflow#36 · Filter by author ynshen opened on Sep 3, 2024

• RuntimeError: view size is not compatible with input tensor's size and stride (at least one dimension spans across two contiguous subspaces). Use .reshape(...) instead.

  bjing2016/alphaflow#34 · Filter by author dcbiton opened on Sep 2, 2024

• alphaflow not working -- keyError: 'ptm'

  bjing2016/alphaflow#33 · Filter by author marinaort opened on Sep 1, 2024
  1

• Alphaflow not working.

  bjing2016/alphaflow#31 · Filter by author johnny-rodriguez opened on Aug 29, 2024
  8

• Diffusion scheduling code making abnormal protein output

  bjing2016/alphaflow#29 · Filter by author jmoojun opened on Jul 3, 2024
  2

• The distance between adjacent alpha carbons is not 3.8 A from the Prior

  bjing2016/alphaflow#25 · Filter by author ZaikaiHe opened on Jun 2, 2024
  1

• Appropriate model_config arguments for initial training upon predicting with long sequence

  bjing2016/alphaflow#17 · Filter by author eunos-1128 opened on Apr 1, 2024
  2