Organization profile and community health files for biotec-line.
This repository controls the public organization overview shown on GitHub and the shared contribution, security, issue, and pull request templates used across the biotec-line bioinformatics projects.
The public profile README is also the maintained repository directory for the organization: it lists all public biotec-line repositories and deliberately excludes private, internal, or unreleased work. The current public index was verified against GitHub on 2026-10-30. The organization contains exactly 3 repositories in total and all 3 are public, so the directory below covers the organization completely.
| Repository | Public role | Search/discovery focus |
|---|---|---|
| .github | Organization landing page, shared community-health files, and llms.txt crawler context | biotec-line organization profile, local-first bioinformatics tools, research-use-only genetic data software |
| VFDistiller | Local-first VCF/gVCF annotation, filtering, validation, and export desktop app for research use only | VCF annotation desktop app, gVCF filtering GUI, gnomAD, ClinVar-oriented fields, FASTA variant review |
| genotype-to-vcf | DTC DNA raw-data to VCF 4.2 converter with GUI and headless CLI paths | 23andMe to VCF, MyHeritage, FTDNA, TellMeGen conversion, GRCh37/GRCh38 detection, dbSNP, FASTA REF lookup |
| Repository | Latest public push seen in GitHub metadata | Notes |
|---|---|---|
| .github | 2026-10-30 | Organization profile start page, shared community-health files, multi-platform CI matrix (profile-parity.yml), and machine-readable llms.txt crawler context. |
| genotype-to-vcf | 2026-10-25 | Active DTC DNA to VCF converter with v1.0.3 release, privacy disclosures (dbSNP network transparency, omitted inferred sex in progress logs), native Windows CI, PySide6 GUI, and headless CLI. |
| VFDistiller | 2026-10-15 | Active local-first VCF/gVCF annotation desktop app with a11y keyboard navigation, multi-resolution app icons, gnomAD/ClinVar fields, Level 1 SBOM text-companion, and research-use-only export workflows. |
| Path | Purpose |
|---|---|
| profile/README.md | Public organization profile for github.com/biotec-line (English) |
| profile/README_de.md | Public organization profile for github.com/biotec-line (German / Deutsch) |
| llms.txt | Machine-readable context for search engines, crawlers, and LLM tools |
| CONTRIBUTING.md | Shared contribution guidelines |
| SECURITY.md | Shared security policy |
| ISSUE_TEMPLATE/ | Shared issue templates |
| PULL_REQUEST_TEMPLATE.md | Shared pull request checklist |