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Error using custom org.db without ENTREZID keytype

Status: Open.

#823 In YuLab-SMU/clusterProfiler;

· ethan-baldwin opened on Jun 30, 2026

Big differences in enricher results between clusterProfiler 4.16.0 and clusterProfiler 4.20.0

Status: Open.

#819 In YuLab-SMU/clusterProfiler;

· ckeeling opened on May 14, 2026

groupGO函数运行失败

Status: Open.

#815 In YuLab-SMU/clusterProfiler;

· jiangzhichao47-create opened on Apr 3, 2026

The items in "qvalue" column by enrichKEGG （enrichGO-BP-CC-MF） are all "NA"

Status: Open.

#807 In YuLab-SMU/clusterProfiler;

· Roner2022 opened on Jan 23, 2026

cnetplot() error: enrichResult subset with grepl fails when color_edge="category"

Status: Open.

#802 In YuLab-SMU/clusterProfiler;

· Sophia409 opened on Jan 4, 2026

Has this plot been removed in the latest version of the R package?

Status: Open.

#799 In YuLab-SMU/clusterProfiler;

· JWDu0122 opened on Dec 9, 2025

Error in emapplot_internal(x, showCategory = showCategory, ...) :

Status: Open.

#795 In YuLab-SMU/clusterProfiler;

· JWDu0122 opened on Dec 5, 2025

cex_label_gene not working on v4.14.0

Status: Open.

#794 In YuLab-SMU/clusterProfiler;

· jacobHog opened on Dec 4, 2025

Add GO term level information to enrichment results

Status: Open.

#793 In YuLab-SMU/clusterProfiler;

· Moonerss opened on Dec 3, 2025

add ont argument to enricher

Status: Open.

#791 In YuLab-SMU/clusterProfiler;

· YanisChrys opened on Nov 8, 2025

Why does enrichKEGG() output include Category / Subcategory, but in my case gseKEGG() does not?

Status: Open.

#787 In YuLab-SMU/clusterProfiler;

· laleoarrow opened on Oct 8, 2025

log-10 transformation introduced infinite values

Status: Open.

#785 In YuLab-SMU/clusterProfiler;

· abeedhakhan opened on Aug 30, 2025