Vivarium Collective

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1. vivarium-workbench vivarium-workbench Public

   Browser-based workbench for Vivarium workspaces

   Python 2

2. viva-superpowers viva-superpowers Public

   Claude Code plugin for building vivarium research projects

   Python 1

3. v2ecoli v2ecoli Public

   Whole-cell E. coli model in Vivarium 2

   HTML 1

4. 3d-ecoli 3d-ecoli Public

   3D structural model of an E. coli cell — packs a v2ecoli molecular state into a 3D cell via viva-parsimony

   Python

5. Viva-munk Viva-munk Public

   vivarium wrapper for pymunk

   HTML 2

6. viva-human-atlas viva-human-atlas Public

   HRA/WPP modeling workspace

   HTML